R/plot-autoplot-qntmap.R
autoplot-qntmap.Rd
Create a ggplot object for objects created by qntmap package
# S3 method for qntmap autoplot( object, zname = setdiff(names(object), c("x", "y"))[[1L]], zlim = NULL, colors = c("magma", "viridis", "gray"), unit = c("px", "um", "mm", "cm"), ... ) # S3 method for qm_xmap autoplot( object, zname = setdiff(names(object), c("x", "y"))[[1L]], zlim = NULL, colors = c("magma", "viridis", "gray"), unit = c("px", "um", "mm", "cm"), ... ) # S3 method for qm_cluster autoplot( object, zname = "cluster", zlim = NULL, colors = c("magma", "viridis", "gray"), unit = c("px", "um", "mm", "cm"), ... )
object | an object, whose class will determine the behaviour of autoplot |
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zname | Name of z-axis (fill).
If unset, first column except "x" and "y" is chosen for objects with
|
zlim | Range limit of z-coordinates. This is neglected if z is discrete. |
colors | One of "magma", "viridis", or "gray". Applicable when z-coordinates is numeric. |
unit | Unit of x- and y-axis ("px", "um", "mm" or "cm"). |
... | other arguments passed to specific methods |